Transcript: lnc-VEPH1-2:10

Basic information

LNCipedia transcript ID: lnc-VEPH1-2:10 
LNCipedia gene ID: lnc-VEPH1-2
Location (hg38): chr3:157149947-157150629
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 571 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT092896
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 618.6624 coding 
CPAT coding probability 2.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VEPH1-2:10 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VEPH1-2:10
4.0 lnc-VEPH1-2:10
4.1 lnc-VEPH1-2:10
5.0 lnc-VEPH1-2:10
5.1 lnc-SHOX2-22:10
5.2 lnc-VEPH1-2:10