Transcript: lnc-VEZF1-1:4

Basic information

LNCipedia transcript ID: lnc-VEZF1-1:4 
LNCipedia gene ID: lnc-VEZF1-1
Location (hg38): chr17:57989059-57993455
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2930 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025707; NONHSAT054918
Alternative gene names: XLOC_012534; linc-VEZF1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.7969 non-coding 
CPAT coding probability 0.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VEZF1-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-VEZF1-1:4
3.1 lnc-VEZF1-1:4
4.0 lnc-VEZF1-1:4
4.1 lnc-VEZF1-1:4
5.0 lnc-VEZF1-1:4
5.1 lnc-PTRH2-35:5
5.2 lnc-VEZF1-1:4