Transcript: lnc-VEZF1-1:6

Basic information

LNCipedia transcript ID: lnc-VEZF1-1:6 
LNCipedia gene ID: lnc-VEZF1-1
Location (hg38): chr17:57989062-57990323
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 883 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00025708; NONHSAT054919
Alternative gene names: XLOC_012534; linc-VEZF1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.9678 non-coding 
CPAT coding probability 5.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VEZF1-1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-VEZF1-1:5
3.1 lnc-VEZF1-1:6
4.0 lnc-VEZF1-1:6
4.1 lnc-VEZF1-1:6
5.0 lnc-VEZF1-1:6
5.1 lnc-PTRH2-35:9
5.2 lnc-VEZF1-1:6