Transcript: lnc-VHLL-2:1

Basic information

LNCipedia transcript ID: lnc-VHLL-2:1 
LNCipedia gene ID: lnc-VHLL-2
Location (hg38): chr1:156335115-156338206
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 827 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT006836
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -4.9016 non-coding 
CPAT coding probability 2.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VHLL-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C1orf85-2:3
4.0 lnc-C1orf85-2:3
4.1 lnc-C1orf85-2:3
5.0 lnc-C1orf85-2:3
5.1 lnc-PAQR6-7:1
5.2 lnc-VHLL-2:1