Transcript: lnc-VIRMA-1:3

Basic information

LNCipedia transcript ID: lnc-VIRMA-1:3 
LNCipedia gene ID: lnc-VIRMA-1
Location (hg38): chr8:94626967-94640745
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 11142 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000261437.1|MICT00000347939.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 25.3187 non-coding 
CPAT coding probability 3.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VIRMA-1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIAA1429-1:10
5.0 lnc-KIAA1429-1:10
5.1 lnc-ZNF706-151:3
5.2 lnc-VIRMA-1:3