Transcript: lnc-VKORC1L1-5:8

Basic information

LNCipedia transcript ID: lnc-VKORC1L1-5:8 
LNCipedia gene ID: lnc-VKORC1L1-5
Location (hg38): chr7:65773620-65802067
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 731 bp
Exons: 7
Sources: NONCODE v4
Alternative transcript names: NONHSAT121115
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 180.1785 coding 
CPAT coding probability 20.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VKORC1L1-5:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VKORC1L1-6:1
4.0 lnc-VKORC1L1-6:1
4.1 lnc-VKORC1L1-5:8
5.0 lnc-VKORC1L1-5:8
5.1 lnc-TPST1-5:7
5.2 lnc-VKORC1L1-5:8