Transcript: lnc-VN1R2-5:8

Basic information

LNCipedia transcript ID: lnc-VN1R2-5:8 
LNCipedia gene ID: lnc-VN1R2-5
Location (hg38): chr19:53197101-53211015
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 555 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000269051.1|ENST00000597550.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.4538 non-coding 
CPAT coding probability 1.16% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VN1R2-5:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VN1R2-5:8
5.0 lnc-VN1R2-5:8
5.1 lnc-CACNG8-24:2
5.2 lnc-VN1R2-5:8