Transcript: lnc-VPREB1-26:1

Basic information

LNCipedia transcript ID: lnc-VPREB1-26:1 
LNCipedia gene ID: lnc-VPREB1-26
Location (hg38): chr22:22397032-22397524
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 381 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT083782
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 33.8508 non-coding 
CPAT coding probability 3.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VPREB1-26:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-LL22NC03-63E9.3.1-9:1
4.0 lnc-LL22NC03-63E9.3.1-9:1
4.1 lnc-LL22NC03-63E9.3.1-9:1
5.0 lnc-LL22NC03-63E9.3.1-9:1
5.1 lnc-LRRC74B-51:1
5.2 lnc-VPREB1-26:1