Transcript: lnc-VPREB1-5:1

Basic information

LNCipedia transcript ID: lnc-VPREB1-5:1 
LNCipedia gene ID: lnc-VPREB1-5
Location (hg38): chr22:22185941-22186619
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 679 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT083756
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 13.9234 non-coding 
CPAT coding probability 1.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VPREB1-5:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VPREB1-5:1
4.0 lnc-VPREB1-5:1
4.1 lnc-VPREB1-5:1
5.0 lnc-VPREB1-5:1
5.1 lnc-LRRC74B-43:1
5.2 lnc-VPREB1-5:1