Transcript: lnc-VPS18-1:8

Basic information

LNCipedia transcript ID: lnc-VPS18-1:8 
LNCipedia gene ID: lnc-VPS18-1
RefSeq ID: NR_135836
Location (hg38): chr15:40906809-40909351
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 600 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135836.1
Alternative gene names: LOC105370943


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -113.2018 non-coding 
CPAT coding probability 5.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VPS18-1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-TMEM62-39:3
5.1 lnc-TMEM62-39:3
5.2 lnc-VPS18-1:8