Transcript: lnc-VPS26C-2:2

Basic information

LNCipedia transcript ID: lnc-VPS26C-2:2 
LNCipedia gene ID: lnc-VPS26C-2
Location (hg38): chr21:37363012-37366223
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3212 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000273210.1|ENCT00000274853.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -48.5 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VPS26C-2:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-DSCR3-2:3
5.0 lnc-DSCR3-2:3
5.1 lnc-CRYZL1-48:2
5.2 lnc-VPS26C-2:2