Transcript: lnc-VPS33B-6:2

Basic information

LNCipedia transcript ID: lnc-VPS33B-6:2 
LNCipedia gene ID: lnc-VPS33B-6
Location (hg38): chr15:91296098-91299103
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2926 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT048487
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 24.3943 non-coding 
CPAT coding probability 57.14% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VPS33B-6:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VPS33B-6:2
4.0 lnc-VPS33B-6:2
4.1 lnc-VPS33B-6:2
5.0 lnc-VPS33B-6:2
5.1 lnc-CIB1-21:2
5.2 lnc-VPS33B-6:2