Transcript: lnc-VSIG10-1:1

Basic information

LNCipedia transcript ID: lnc-VSIG10-1:1 
LNCipedia gene ID: lnc-VSIG10-1
Location (hg38): chr12:118174394-118176751
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1770 bp
Exons: 2
Sources: Biogazelle lncRNA chip
Alternative transcript names: ENST00000514257
Alternative gene names: ENSG00000249477


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.155 non-coding 
CPAT coding probability 0.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VSIG10-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-VSIG10-1:1
3.1 lnc-VSIG10-1:1
4.0 lnc-VSIG10-1:1
4.1 lnc-VSIG10-1:1
5.0 lnc-VSIG10-1:1
5.1 lnc-FBXO21-14:1
5.2 lnc-VSIG10-1:1