Transcript: lnc-VSTM2B-17:3

Basic information

LNCipedia transcript ID: lnc-VSTM2B-17:3 
LNCipedia gene ID: lnc-VSTM2B-17
Location (hg38): chr19:28065267-28067797
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2531 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267509.1|ENCT00000203920.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 27.9507 non-coding 
CPAT coding probability 6.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VSTM2B-17:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VSTM2B-17:3
5.0 lnc-VSTM2B-17:3
5.1 lnc-GPI-77:3
5.2 lnc-VSTM2B-17:3