Transcript: lnc-VSTM2B-17:4

Basic information

LNCipedia transcript ID: lnc-VSTM2B-17:4 
LNCipedia gene ID: lnc-VSTM2B-17
Location (hg38): chr19:28065267-28096028
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 254 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267509.1|FTMT27500014771.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -96.0106 non-coding 
CPAT coding probability 4.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VSTM2B-17:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VSTM2B-17:4
5.0 lnc-VSTM2B-17:4
5.1 lnc-GPI-77:4
5.2 lnc-VSTM2B-17:4