Transcript: lnc-VSTM2B-17:5

Basic information

LNCipedia transcript ID: lnc-VSTM2B-17:5 
LNCipedia gene ID: lnc-VSTM2B-17
Location (hg38): chr19:28065267-28125394
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 540 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000267509.1|ENST00000586671.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -143.7655 non-coding 
CPAT coding probability 7.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VSTM2B-17:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-VSTM2B-17:5
5.0 lnc-VSTM2B-17:5
5.1 lnc-GPI-77:5
5.2 lnc-VSTM2B-17:5