Transcript: lnc-VSTM2B-9:38

Basic information

LNCipedia transcript ID: lnc-VSTM2B-9:38 
LNCipedia gene ID: lnc-VSTM2B-9
RefSeq ID: NR_110687
Location (hg38): chr19:27793895-27806782
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1829 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110687.1
Alternative gene names: LOC101927151


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 61.4352 coding 
CPAT coding probability 34.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VSTM2B-9:38 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-ZNF429-64:27
5.1 lnc-ZNF429-64:27
5.2 lnc-VSTM2B-9:38