Transcript: lnc-VSTM2B-9:4

Basic information

LNCipedia transcript ID: lnc-VSTM2B-9:4 
LNCipedia gene ID: lnc-VSTM2B-9
Location (hg38): chr19:27793422-27806247
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1295 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT063999
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 61.4352 coding 
CPAT coding probability 50.75% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VSTM2B-9:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VSTM2B-9:4
4.0 lnc-VSTM2B-9:4
4.1 lnc-VSTM2B-9:4
5.0 lnc-VSTM2B-9:4
5.1 lnc-ZNF429-64:6
5.2 lnc-VSTM2B-9:4