Transcript: lnc-VTCN1-3:1

Basic information

LNCipedia transcript ID: lnc-VTCN1-3:1 
LNCipedia gene ID: lnc-VTCN1-3
Location (hg38): chr1:117364813-117367448
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2636 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT005478
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -133.5357 non-coding 
CPAT coding probability 36.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-VTCN1-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-VTCN1-3:1
4.0 lnc-VTCN1-3:1
4.1 lnc-VTCN1-3:1
5.0 lnc-VTCN1-3:1
5.1 lnc-CD58-20:1
5.2 lnc-VTCN1-3:1