Transcript: lnc-VWA8-1:1

Basic information

LNCipedia transcript ID: lnc-VWA8-1:1 
LNCipedia gene ID: lnc-VWA8-1
Location (hg38): chr13:42042490-42048728
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 6239 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA362:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.4882 non-coding 
CPAT coding probability 87.43% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-VWA8-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-KIAA0564-1:2
4.1 lnc-KIAA0564-1:2
5.0 lnc-KIAA0564-1:2
5.1 lnc-CCDC169-75:1
5.2 lnc-VWA8-1:1