Transcript: lnc-WAC-3:3

Basic information

LNCipedia transcript ID: lnc-WAC-3:3 
LNCipedia gene ID: lnc-WAC-3
Location (hg38): chr10:28303332-28308920
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3648 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000109909.1|MICT00000038912.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.5317 non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WAC-3:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-WAC-3:3
5.0 lnc-WAC-3:3
5.1 lnc-NPY4R2-235:3
5.2 lnc-WAC-3:3