Transcript: lnc-WASHC5-14:3

Basic information

LNCipedia transcript ID: lnc-WASHC5-14:3 
LNCipedia gene ID: lnc-WASHC5-14
Location (hg38): chr8:125696916-125698886
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1971 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000103991.1|FTMT23000006555.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -43.6588 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WASHC5-14:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-KIAA0196-14:1
5.0 lnc-KIAA0196-14:1
5.1 lnc-WASHC5-18:1
5.2 lnc-WASHC5-14:3