Transcript: lnc-WBP4-2:1

Basic information

LNCipedia transcript ID: lnc-WBP4-2:1 
LNCipedia gene ID: lnc-WBP4-2
Ensembl Gene ID: ENSG00000278390
Ensembl Transcript ID: ENST00000619407
Location (hg38): chr13:41132939-41236686
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1910 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000499512; NONHSAT033377; ENST00000619407.4
Alternative gene names: ENSG00000244848; AL354696.2; ENSG00000278390.4; RP11-74J13.8


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.8722 non-coding 
CPAT coding probability 1.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WBP4-2:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WBP4-2:1
3.1 lnc-WBP4-2:1
4.0 lnc-WBP4-2:1
4.1 lnc-WBP4-2:1
5.0 lnc-WBP4-2:1
5.1 lnc-KL-75:2
5.2 lnc-WBP4-2:1