Transcript: lnc-WBP4-2:6

Basic information

LNCipedia transcript ID: lnc-WBP4-2:6 
LNCipedia gene ID: lnc-WBP4-2
Ensembl Gene ID: ENSG00000278390
Ensembl Transcript ID: ENST00000616251
Location (hg38): chr13:41133011-41187568
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 605 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000616251.1
Alternative gene names: ENSG00000278390.4; RP11-74J13.8; AL354696.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -65.691 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WBP4-2:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-WBP4-2:6
4.1 lnc-WBP4-2:6
5.0 lnc-WBP4-2:6
5.1 lnc-KL-75:11
5.2 lnc-WBP4-2:6