Transcript: lnc-WDFY2-4:3

Basic information

LNCipedia transcript ID: lnc-WDFY2-4:3 
LNCipedia gene ID: lnc-WDFY2-4
Location (hg38): chr13:51804297-51813220
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 569 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000456688.1; RP11-327P2.5-001; OTTHUMT00000045041.1; NONHSAT033953
Alternative gene names: ENSG00000231856.1; RP11-327P2.5; OTTHUMG00000016953.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -269.6024 non-coding 
CPAT coding probability 19.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WDFY2-4:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDFY2-1:1
4.0 lnc-WDFY2-1:1
4.1 lnc-CCDC70-4:6
5.0 lnc-CCDC70-4:6
5.1 lnc-KL-215:6
5.2 lnc-WDFY2-4:3