Transcript: lnc-WDFY2-4:4

Basic information

LNCipedia transcript ID: lnc-WDFY2-4:4 
LNCipedia gene ID: lnc-WDFY2-4
Ensembl Gene ID: ENSG00000231856
Ensembl Transcript ID: ENST00000456688
Location (hg38): chr13:51804297-51813832
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1181 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000456688.2
Alternative gene names: ENSG00000231856.2; RP11-327P2.5; AL162377.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -133.2167 non-coding 
CPAT coding probability 27.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WDFY2-4:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-WDFY2-1:6
4.1 lnc-CCDC70-4:7
5.0 lnc-CCDC70-4:7
5.1 lnc-KL-215:7
5.2 lnc-WDFY2-4:4