Transcript: lnc-WDR26-1:1

Basic information

LNCipedia transcript ID: lnc-WDR26-1:1 
LNCipedia gene ID: lnc-WDR26-1
Location (hg38): chr1:224615296-224616220
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 403 bp
Exons: 3
Sources: Broad Institute; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00000744; ENST00000437416.1; RP11-100E13.1-001; OTTHUMT00000092019.1; NONHSAT009820
Alternative gene names: XLOC_001228; linc-WDR26-2; ENSG00000233384.1; RP11-100E13.1; OTTHUMG00000037718.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -255.5682 non-coding 
CPAT coding probability 11.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WDR26-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WDR26-1:1
3.1 lnc-WDR26-1:1
4.0 lnc-WDR26-1:1
4.1 lnc-WDR26-1:1
5.0 lnc-WDR26-1:1
5.1 lnc-LEFTY2-24:10
5.2 lnc-WDR26-1:1