Transcript: lnc-WDR45B-1:1

Basic information

LNCipedia transcript ID: lnc-WDR45B-1:1 
LNCipedia gene ID: lnc-WDR45B-1
Location (hg38): chr17:82603738-82604525
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 441 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000576063.1; RP13-638C3.4-002; OTTHUMT00000439995.1; NONHSAT056736
Alternative gene names: ENSG00000261845.1; RP13-638C3.4; OTTHUMG00000177963.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -193.1189 non-coding 
CPAT coding probability 7.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WDR45B-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WDR45L-1:1
4.0 lnc-WDR45L-1:1
4.1 lnc-WDR45L-1:1
5.0 lnc-WDR45L-1:1
5.1 lnc-CD7-22:1
5.2 lnc-WDR45B-1:1