Transcript: lnc-WIF1-6:33

Basic information

LNCipedia transcript ID: lnc-WIF1-6:33 
LNCipedia gene ID: lnc-WIF1-6
Location (hg38): chr12:65544239-65557311
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 724 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00020211
Alternative gene names: XLOC_010108; linc-WIF1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -268.1994 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WIF1-6:33 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-366L20.2.1-1:10
3.1 lnc-RP11-366L20.2.1-2:10
4.0 lnc-RP11-366L20.2.1-6:17
4.1 lnc-RP11-366L20.2.1-6:17
5.0 lnc-RP11-366L20.2.1-6:17
5.1 lnc-LLPH-17:33
5.2 lnc-WIF1-6:33