Transcript: lnc-WISP1-2:2

Basic information

LNCipedia transcript ID: lnc-WISP1-2:2 
LNCipedia gene ID: lnc-WISP1-2
Location (hg38): chr8:133572171-133573861
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1546 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000561761.1; RP11-629O1.2-001; OTTHUMT00000423271.1; NONHSAT129239
Alternative gene names: ENSG00000261220.1; RP11-629O1.2; OTTHUMG00000173496.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.9716 non-coding 
CPAT coding probability 22.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WISP1-2:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WISP1-2:2
4.0 lnc-WISP1-2:2
4.1 lnc-WISP1-2:2
5.0 lnc-WISP1-2:2
5.1 lnc-MYC-53:2
5.2 lnc-WISP1-2:2