Transcript: lnc-WNT3-2:1

Basic information

LNCipedia transcript ID: lnc-WNT3-2:1 
LNCipedia gene ID: lnc-WNT3-2
Location (hg38): chr17:46716364-46716578
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 215 bp
Exons: 1
Sources: Nielsen et al.,2014
Alternative transcript names: expReg_chr17_8951_-
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.9998 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WNT3-2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WNT3-2:1
4.0 lnc-WNT3-2:1
4.1 lnc-WNT3-2:1
5.0 lnc-WNT3-2:1
5.1 lnc-GFAP-51:1
5.2 lnc-WNT3-2:1