Transcript: lnc-WNT5A-5:2

Basic information

LNCipedia transcript ID: lnc-WNT5A-5:2 
LNCipedia gene ID: lnc-WNT5A-5
Location (hg38): chr3:55325190-55327253
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 442 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: CATG00000064707.1|FTMT20900045066.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -166.6781 non-coding 
CPAT coding probability 5.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WNT5A-5:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-WNT5A-5:2
5.0 lnc-WNT5A-5:2
5.1 lnc-FAM208A-12:2
5.2 lnc-WNT5A-5:2