Transcript: lnc-WNT5B-5:1

Basic information

LNCipedia transcript ID: lnc-WNT5B-5:1 
LNCipedia gene ID: lnc-WNT5B-5
Location (hg38): chr12:1370752-1374685
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 2244 bp
Exons: 2
Sources: Nielsen et al.,2014
Alternative transcript names: l_578_NR_028415
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.3094 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WNT5B-5:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WNT5B-5:1
4.0 lnc-WNT5B-5:1
4.1 lnc-WNT5B-5:1
5.0 lnc-WNT5B-5:1
5.1 lnc-CLEC4D-149:1
5.2 lnc-WNT5B-5:1