Transcript: lnc-WRB-2:3

Basic information

LNCipedia transcript ID: lnc-WRB-2:3 
LNCipedia gene ID: lnc-WRB-2
Location (hg38): chr21:39313891-39329817
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1132 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00029020; NONHSAT082160
Alternative gene names: XLOC_013942; linc-WRB-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -41.1282 non-coding 
CPAT coding probability 1.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WRB-2:3 yes no no no

Available literature

  1. Reymond (2002), Nineteen additional unpredicted transcripts from human chromosome 21., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WRB-2:3
3.1 lnc-WRB-2:3
4.0 lnc-WRB-2:3
4.1 lnc-WRB-2:3
5.0 lnc-WRB-2:3
5.1 lnc-SIM2-66:3
5.2 lnc-WRB-2:3