Transcript: lnc-WRNIP1-3:1

Basic information

LNCipedia transcript ID: lnc-WRNIP1-3:1 
LNCipedia gene ID: lnc-WRNIP1-3
Location (hg38): chr6:2243877-2245574
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1276 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000500716; NONHSAT106618
Alternative gene names: ENSG00000246005; AL158139.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -83.0465 non-coding 
CPAT coding probability 1.08% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-WRNIP1-3:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WRNIP1-3:1
3.1 lnc-WRNIP1-3:1
4.0 lnc-WRNIP1-3:1
4.1 lnc-WRNIP1-3:1
5.0 lnc-WRNIP1-3:1
5.1 lnc-RIPK1-80:1
5.2 lnc-WRNIP1-3:1