Transcript: lnc-XCL2-2:7

Basic information

LNCipedia transcript ID: lnc-XCL2-2:7 
LNCipedia gene ID: lnc-XCL2-2
RefSeq ID: NR_037851
Location (hg38): chr1:168400188-168422656
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2442 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_037851.1
Alternative gene names: LOC100505918


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -31.0158 non-coding 
CPAT coding probability 12.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XCL2-2:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-SH2D1B-75:6
5.1 lnc-SH2D1B-75:6
5.2 lnc-XCL2-2:7