Transcript: lnc-XCL2-3:1

Basic information

LNCipedia transcript ID: lnc-XCL2-3:1 
LNCipedia gene ID: lnc-XCL2-3
Location (hg38): chr1:168537932-168550735
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1725 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_145_NR_026957
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.6832 non-coding 
CPAT coding probability 15.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XCL2-3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XCL2-3:1
4.0 lnc-XCL2-3:1
4.1 lnc-XCL2-3:1
5.0 lnc-XCL2-3:1
5.1 lnc-SH2D1B-76:2
5.2 lnc-XCL2-3:1