Transcript: lnc-XIRP2-1:2

Basic information

LNCipedia transcript ID: lnc-XIRP2-1:2 
LNCipedia gene ID: lnc-XIRP2-1
Location (hg38): chr2:167293001-167558333
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 632 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228222.1|ENST00000442316.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -21.323 non-coding 
CPAT coding probability 40.15% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-XIRP2-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-XIRP2-1:2
5.0 lnc-XIRP2-1:2
5.1 lnc-PHOSPHO2-22:1
5.2 lnc-XIRP2-1:2