Transcript: lnc-XKR6-18:1

Basic information

LNCipedia transcript ID: lnc-XKR6-18:1 
LNCipedia gene ID: lnc-XKR6-18
Ensembl Gene ID: ENSG00000280273
Ensembl Transcript ID: ENST00000622929
Location (hg38): chr8:11283500-11285068
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1569 bp
Exons: 1
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000622929.1
Alternative gene names: ENSG00000280273.2; AF131216.4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 158.2137 coding 
CPAT coding probability 9.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-XKR6-18:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 lnc-PINX1-18:1
5.1 lnc-PINX1-18:1
5.2 lnc-XKR6-18:1