Transcript: lnc-XKR6-3:5

Basic information

LNCipedia transcript ID: lnc-XKR6-3:5 
LNCipedia gene ID: lnc-XKR6-3
Location (hg38): chr8:11345748-11347500
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1097 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255020.1|ENST00000525867.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.5959 non-coding 
CPAT coding probability 5.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XKR6-3:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-AF131216.5.1-1:4
5.0 lnc-AF131216.5.1-1:4
5.1 lnc-PINX1-21:5
5.2 lnc-XKR6-3:5