Transcript: lnc-XPC-6:1

Basic information

LNCipedia transcript ID: lnc-XPC-6:1 
LNCipedia gene ID: lnc-XPC-6
Location (hg38): chr3:14322835-14326762
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1732 bp
Exons: 4
Sources: Nielsen et al.,2014
Alternative transcript names: l_2315_chr3:14364334-14368262_ovary
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.0935 non-coding 
CPAT coding probability 20.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XPC-6:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XPC-6:1
4.0 lnc-XPC-6:1
4.1 lnc-XPC-6:1
5.0 lnc-XPC-6:1
5.1 lnc-SH3BP5-30:1
5.2 lnc-XPC-6:1