Transcript: lnc-XPC-9:2

Basic information

LNCipedia transcript ID: lnc-XPC-9:2 
LNCipedia gene ID: lnc-XPC-9
Location (hg38): chr3:14514188-14517303
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 531 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT088349
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1322.3484 coding 
CPAT coding probability 57.12% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-XPC-9:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-XPC-5:9
4.0 lnc-XPC-5:9
4.1 lnc-XPC-5:9
5.0 lnc-XPC-5:9
5.1 lnc-SH3BP5-25:2
5.2 lnc-XPC-9:2