Transcript: lnc-XRN2-1:15

Basic information

LNCipedia transcript ID: lnc-XRN2-1:15 
LNCipedia gene ID: lnc-XRN2-1
Location (hg38): chr20:21397457-21437969
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 381 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000225280.2|HBMT00000884088.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -78.6035 non-coding 
CPAT coding probability 0.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-XRN2-1:15 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-XRN2-1:15
5.0 lnc-XRN2-1:15
5.1 lnc-XRN2-1:15
5.2 lnc-XRN2-1:15