Transcript: lnc-YOD1-1:1

Basic information

LNCipedia transcript ID: lnc-YOD1-1:1 
LNCipedia gene ID: lnc-YOD1-1
Location (hg38): chr1:207401583-207416221
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 572 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001789; NONHSAT009119
Alternative gene names: XLOC_001178; linc-YOD1-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.0581 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-YOD1-1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-YOD1-1:1
3.1 lnc-YOD1-1:1
4.0 lnc-YOD1-1:1
4.1 lnc-YOD1-1:1
5.0 lnc-YOD1-1:1
5.1 lnc-CD34-1:3
5.2 lnc-YOD1-1:1