Transcript: lnc-YWHAH-1:2

Basic information

LNCipedia transcript ID: lnc-YWHAH-1:2 
LNCipedia gene ID: lnc-YWHAH-1
Location (hg38): chr22:31963356-31970400
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 598 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT084924; FPKM1_group_20440_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -86.2048 non-coding 
CPAT coding probability 4.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-YWHAH-1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-YWHAH-1:2
4.0 lnc-YWHAH-1:2
4.1 lnc-YWHAH-1:2
5.0 lnc-YWHAH-1:2
5.1 lnc-SFI1-10:1
5.2 lnc-YWHAH-1:2