Transcript: lnc-ZBED5-1:4

Basic information

LNCipedia transcript ID: lnc-ZBED5-1:4 
LNCipedia gene ID: lnc-ZBED5-1
Location (hg38): chr11:10884172-10896563
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1086 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020040; NONHSAT018008
Alternative gene names: XLOC_009372; linc-ZBED5-2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 15.1777 non-coding 
CPAT coding probability 1.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZBED5-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZBED5-1:4
3.1 lnc-ZBED5-1:4
4.0 lnc-ZBED5-1:4
4.1 lnc-ZBED5-1:4
5.0 lnc-ZBED5-1:4
5.1 lnc-C11orf16-44:10
5.2 lnc-ZBED5-1:4