Transcript: lnc-ZBTB2-1:4

Basic information

LNCipedia transcript ID: lnc-ZBTB2-1:4 
LNCipedia gene ID: lnc-ZBTB2-1
RefSeq ID: NR_125868
Location (hg38): chr6:151196673-151228457
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 885 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125868; NR_125868.1
Alternative gene names: LOC102723831


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -9.3586 non-coding 
CPAT coding probability 4.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZBTB2-1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZBTB2-1:4
4.0 lnc-ZBTB2-1:4
4.1 lnc-ZBTB2-1:4
5.0 lnc-ZBTB2-1:4
5.1 lnc-ZBTB2-1:4
5.2 lnc-ZBTB2-1:4