Transcript: lnc-ZBTB25-1:1

Basic information

LNCipedia transcript ID: lnc-ZBTB25-1:1 
LNCipedia gene ID: lnc-ZBTB25-1
Location (hg38): chr14:64440580-64441763
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 435 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000555796.1; CTD-2555O16.2-001; OTTHUMT00000412364.1; NONHSAT037338
Alternative gene names: ENSG00000258824.1; CTD-2555O16.2; OTTHUMG00000171216.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -167.4408 non-coding 
CPAT coding probability 0.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZBTB25-1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZBTB25-1:1
4.0 lnc-ZBTB25-1:1
4.1 lnc-ZBTB25-1:1
5.0 lnc-ZBTB25-1:1
5.1 lnc-DHRS7-44:3
5.2 lnc-ZBTB25-1:1