Transcript: lnc-ZBTB25-1:2

Basic information

LNCipedia transcript ID: lnc-ZBTB25-1:2 
LNCipedia gene ID: lnc-ZBTB25-1
Ensembl Gene ID: ENSG00000272909
Ensembl Transcript ID: ENST00000609125
Location (hg38): chr14:64440369-64442238
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1870 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609125.1
Alternative gene names: ENSG00000272909.1; CTD-2555O16.4; AL122035.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 138.2429 coding 
CPAT coding probability 3.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
lnc-ZBTB25-1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ZBTB25-1:2
4.0 lnc-ZBTB25-1:2
4.1 lnc-ZBTB25-1:2
5.0 lnc-ZBTB25-1:2
5.1 lnc-DHRS7-44:2
5.2 lnc-ZBTB25-1:2