Transcript: lnc-ZBTB37-1:3

Basic information

LNCipedia transcript ID: lnc-ZBTB37-1:3 
LNCipedia gene ID: lnc-ZBTB37-1
Location (hg38): chr1:174022511-174022985
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 333 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000224977.1|ENST00000424181.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -255.7559 non-coding 
CPAT coding probability 1.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
lnc-ZBTB37-1:3 no no no no

Available literature

  1. Gu (2015), Aberrant expression of long noncoding RNAs in chronic thromboembolic pulmonary hypertension., Mol Med Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-ZBTB37-1:3
5.0 lnc-ZBTB37-1:3
5.1 lnc-SOAT1-41:3
5.2 lnc-ZBTB37-1:3